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Pattern Recognition in Bioinformatics [electronic resource] : Second IAPR International Workshop, PRIB 2007, Singapore, October 1-2, 2007, Proceedings / edited by Jagath C.- Rajapakse, Bertil Schmidt, Gwenn Volkert.

Edition:
1st ed. 2007.
Publication:
Berlin, Heidelberg : Springer Berlin Heidelberg : Imprint: Springer, 2007.
Series:
Computer Science (Springer-11645)
Lecture notes in computer science. Lecture notes in bioinformatics 4774
Lecture Notes in Bioinformatics ; 4774
Format/Description:
Book
1 online resource (XVIII, 410 pages)
Subjects:
Biochemistry.
Database management.
Artificial intelligence.
Data mining.
Bioinformatics.
Mathematical statistics.
Local subjects:
Biochemistry, general. (search)
Database Management. (search)
Artificial Intelligence. (search)
Data Mining and Knowledge Discovery. (search)
Computational Biology/Bioinformatics. (search)
Probability and Statistics in Computer Science. (search)
System Details:
text file PDF
Summary:
The advancements of computational and informational techniques have enabled in silico testing of many lab-based experiments in life sciences before performing them in in vitro or in vivo. Though computational techniques are not capable of mimicking all wet-lab experiments, bioinformatics will inevitably play a major role in future medical practice. For example, in the pursuit of new drugs it can reduce the costs and complexity involved in expensive wet-lab experiments. It is expected that by 2010, sequencing of individual genomes will be affordable generating an unprecedented increase of life sciences data, in the form of sequences, expressions, networks, images, literature. Pattern recognition techniques lie at the heart of discovery of new insights into biological knowledge, as the presence of particular patterns or structure is often an indication of its function. The aim of the workshop series Pattern Recognition in Bioinformatics (PRIB) is to bring pattern recognition scientists and life scientists together to promote pattern recognition applications to solve life sciences problems. This volume presents the proceedings of the 2nd IAPR Workshop PRIB 2007 held in Singapore, October 1-2, 2007. It includes 38 technical contributions that were selected by the International Program Committee from 125 submissions. Each of these rigorously reviewed papers was presented orally at the workshop. The proceedings consists of six parts. Part 1: Sequence Analysis; Part 2: Prediction of Protein Structure, Interaction, and Localization; Part 3: Gene Expression Analysis; Part 4: Pathway Analysis; Part 5: Medical Informatics; and Part 6: Bioimaging.
Contents:
Sequence Analysis
Automated Methods of Predicting the Function of Biological Sequences Using GO and Rough Set
C-Based Design Methodology for FPGA Implementation of ClustalW MSA
A Two-Phase ANN Method for Genome-Wide Detection of Hormone Response Elements
An Expert Knowledge-Guided Mutation Operator for Genome-Wide Genetic Analysis Using Genetic Programming
cDNA-Derived Amino Acid Sequence from Rat Brain A2aR Possesses Conserved Motifs PMNYM of  TM 5 Domain, Which May Be Involved in Dimerization of A2aR
Strong GC and AT Skew Correlation in Chicken Genome
Comparative Analysis of a Hierarchical Bayesian Method for Quantitative Trait Loci Analysis for the Arabidopsis Thaliana
Prediction of Protein Structure, Interaction and Localization
Using Decision Templates to Predict Subcellular Localization of Protein
Generalized Schemata Theorem Incorporating Twin Removal for Protein Structure Prediction
Using Fuzzy Support Vector Machine Network to Predict Low Homology Protein Structural Classes
SVM-BetaPred: Prediction of Right-Handed ß-Helix Fold from Protein Sequence Using SVM
Protein Fold Recognition Based Upon the Amino Acid Occurrence
Using Efficient RBF Network to Identify Interface Residues Based on PSSM Profiles and Biochemical Properties
Dynamic Outlier Exclusion Training Algorithm for Sequence Based Predictions in Proteins Using Neural Network
Bioinformatics on ?-Barrel Membrane Proteins: Sequence and Structural Analysis, Discrimination and Prediction
Estimation of Evolutionary Average Hydrophobicity Profile from a Family of Protein Sequences
Gene Expression Analysis
APMA Database for Affymetrix Target Sequences Mapping, Quality Assessment and Expression Data Mining
Ensemble of Dissimilarity Based Classifiers for Cancerous Samples Classification
Gene Expression Analysis of Leukemia Samples Using Visual Interpretation of Small Ensembles: A Case Study
Ant-MST: An Ant-Based Minimum Spanning Tree for Gene Expression Data Clustering
Integrating Gene Expression Data from Microarrays Using the Self-Organising Map and the Gene Ontology
Order Preserving Clustering by Finding Frequent Orders in Gene Expression Data
Correlation-Based Relevancy and Redundancy Measures for Efficient Gene Selection
SVM-RFE with Relevancy and Redundancy Criteria for Gene Selection
In Silico Expression Profiles of Human Endogenous Retroviruses
Pathway Analysis
A Framework for Path Analysis in Gene Regulatory Networks
Transcriptional Gene Regulatory Network Reconstruction Through Cross Platform Gene Network Fusion
Reconstruction of Protein-Protein Interaction Pathways by Mining Subject-Verb-Objects Intermediates
Validation of Gene Regulatory Networks from Protein-Protein Interaction Data: Application to Cell-Cycle Regulation
Medical Informatics
Rough Sets and Fuzzy Sets Theory Applied to the Sequential Medical Diagnosis
In silico Identification of Putative Drug Targets in Pseudomonas aeruginosa Through Metabolic Pathway Analysis
Understanding Prediction Systems for HLA-Binding Peptides and T-Cell Epitope Identification
Predicting Binding Peptides with Simultaneous Optimization of Entropy and Evolutionary Distance
Bioimaging
3D Automated Nuclear Morphometric Analysis Using Active Meshes
Time-Frequency Method Based Activation Detection in Functional MRI Time-Series
High Performance Classification of Two Imagery Tasks in the Cue-Based Brain Computer Interface
Human Brain Anatomical Connectivity Analysis Using Sequential Sampling and Resampling
Classification of CT Brain Images of Head Trauma.
Contributor:
Rajapakse, Jagath C.-. editor., Editor,
Schmidt, Bertil, editor., Editor,
Volkert, Gwenn, editor., Editor,
SpringerLink (Online service)
Contained In:
Springer eBooks
Other format:
Printed edition:
Printed edition:
ISBN:
978-3-540-75286-8
9783540752868
Publisher Number:
10.1007/978-3-540-75286-8 doi
Access Restriction:
Restricted for use by site license.
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